Mapped reads for uncultivated Streptococcus bacterium UBA11282 genome... - SRA

SRX3577975: Mapped reads for uncultivated Streptococcus bacterium UBA11282 genome recovered from ERX644123
1 ILLUMINA (Illumina HiSeq 2000) run: 672,365 spots, 115.5M bases, 53.1Mb downloads

Design: Reads from ERX644123 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA11282 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

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Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Streptococcus bacterium UBA11282 genome recovered from ERX644123

SAMN08019621 • SRS2847703 • All experiments • All runs

Organism: Streptococcus sp.

Library:

Name: UBA11282_library

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 672,365 spots, 115.5M bases, 53.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR6488310	672,365	115.5M	53.1Mb	2018-02-23

ID:: 4963477

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Sequence Read Archive

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